BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023A02SP1|AL427980
(1039 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1255 1943 0.0
>3x_Contig1255
Length = 5009
Score = 1943 bits (979), Expect = 0.0
Identities = 1016/1023 (99%), Gaps = 5/1023 (0%)
Strand = Plus / Minus
Query: 21 acagcttttttggtgtgtttcctggtgaaaataggttaagatcaaccatacggagagagc 80
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5007 acagcttttttggtgtgtt-cctggtgaaaataggttaagatcaaccatacggagagagc 4949
Query: 81 acgcattggaagatgcttataatgcctacggtgcggtaggcgagatgtttaaagaaaaac 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4948 acgcattggaagatgcttataatgcctacggtgcggtaggcgagatgtttaaagaaaaac 4889
Query: 141 tcggaatacaatttgtgaatgaattcggtcctgaggccggtatagatggtggaggtatca 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4888 tcggaatacaatttgtgaatgaattcggtcctgaggccggtatagatggtggaggtatca 4829
Query: 201 cgaaggaatttttacaaacgttagtccaagaaggcttcattaatcagcctttcaaattat 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4828 cgaaggaatttttacaaacgttagtccaagaaggcttcattaatcagcctttcaaattat 4769
Query: 261 tcgacacaacatcattcaataaactttatccttctaagaatgtttccccccaaaatttga 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4768 tcgacacaacatcattcaataaactttatccttctaagaatgtttccccccaaaatttga 4709
Query: 321 agtacatttctttcatggggaagattttgggaaagtgcttatatgaaaatattttggttg 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4708 agtacatttctttcatggggaagattttgggaaagtgcttatatgaaaatattttggttg 4649
Query: 381 atgttgaattagcagatttctttttgaagaagattctcaacgttgaaaataacatgaacg 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4648 atgttgaattagcagatttctttttgaagaagattctcaacgttgaaaataacatgaacg 4589
Query: 441 tgccattcaatgatctatattctttagatcctgaatattatagaaacttgatgaaactct 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4588 tgccattcaatgatctatattctttagatcctgaatattatagaaacttgatgaaactct 4529
Query: 501 tggagatgtcagagaatgagctagcgtatatggatttatactttgaggttcctgatgcac 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4528 tggagatgtcagagaatgagctagcgtatatggatttatactttgaggttcctgatgcac 4469
Query: 561 caaatggtaaacggataccattaatcaaggatggcttgtctacaaaggtaacgcagaaga 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4468 caaatggtaaacggataccattaatcaaggatggcttgtctacaaaggtaacgcagaaga 4409
Query: 621 atgttttcgaatacattactcgcatttctcattataagttgaacttacaattatacactg 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4408 atgttttcgaatacattactcgcatttctcattataagttgaacttacaattatacactg 4349
Query: 681 tgaccagtaggttcattactggtctttcgtatatgatacctgcacattggttgagaatgt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4348 tgaccagtaggttcattactggtctttcgtatatgatacctgcacattggttgagaatgt 4289
Query: 741 tcacatcatatgaattgaagaccctaatcagtggttctgagaaagatttcgacctcgaag 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 tcacatcatatgaattgaagaccctaatcagtggttctgagaaagatttcgacctcgaag 4229
Query: 801 acttaaagaaaaacacgtcatatggtggcttctcggaaagcagcgtcacaatccaacatt 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 acttaaagaaaaacacgtcatatggtggcttctcggaaagcagcgtcacaatccaacatt 4169
Query: 861 tctggcaagtactgagtagttttacaccagaagaaaggcgaaaatttctaaaattcgtct 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 tctggcaagtactgagtagttttacaccagaagaaaggcgaaaatttctaaaattcgtct 4109
Query: 921 tttctgtccccacagcgccgctcaaaggctt-cawtctctaaatccattatttgggatac 979
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 4108 tttctgtccccacagcgccgctcaaaggcttccattctctaaatccattatttgggatac 4049
Query: 980 gtaacgctggtgatg-aactgatagacta-ccacagcatc-acgtgcatcaatttattga 1036
||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 4048 gtaacgctggtgatgaaactgatagactacccacagcatcaacgtgcatcaatttattga 3989
Query: 1037 rgt 1039
||
Sbjct: 3988 agt 3986
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8424
Number of Sequences: 1807
Number of extensions: 8424
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 1039
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1023
effective length of database: 10,329,639
effective search space: 10567220697
effective search space used: 10567220697
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)